Nevermind. I jumped to the end of the closed Gateway discussion, and it appears to be defunct. I wish they would remove the link from the client homepage.
I just started a new game, and it is happening in the early missions as well. For me, it's specific to when I get new directives from the primary mission; when I warp from the first part of the mission my ship isn't visible warping into the next location. This is also evident in the video above. The game gave the play a…