If you are having a problem with you powerbar and duty officers snapping back to something that you had before you changed them or if powers are disappearing because you changed a Bridge Officer, then the Fix is to Update you Ship Loadout, that fixed it for me,
Now I have a Suggestion if you make a significant change to your Power Bar and/or Duty Officers that we be given a popup on Beam Down if we would like to update our Ship Loadout as if I knew that this was the cause of my problem I could have fixed it instantly.
Anyways Props goes to Draigo@main101 he pointed me in the right direction, if not having solved the problem outright.
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My PvE/PvP hybrid skill tree
I am, but it didnt immediately fix it I had to manually load up the new overwritten profile before it took over, have you or others who this hasn't worked for tried that?