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Reptilian Extraction: invisible pirate ship
In the Reptilian Extraction quest, after you land on AI ship and then immediately turn right to look at the pirate ship behind you, the pirate ship will not slide in to park beside AI ship. The quest can continue though but with pirates jump in from thin air. You can also shoot the invisible ship and see the fire in the sky. In the meanwhile, the pirate ship is still visually behind AI ship.